Source: Salinispora tropica CNB-440| SMC ID | 4487 | ||||||||||||||
| Type of Sequence | Whole genome sequence | ||||||||||||||
| NCBI Taxonomy ID | 369723  |
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| Taxonomy |
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| Data Source Description | RefSeq | ||||||||||||||
| RefSeq Accession ID | GCF_000016425.1 |
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| Project Description | Salinispora tropica CNB-440, whole genome sequence - NCBI Reference Sequence Database | ||||||||||||||
| Assembly Size | 5,183,331 bp | ||||||||||||||
| Scaffolds | 1 | ||||||||||||||
| GC Content | 69.46% | ||||||||||||||
| BGC Count | 20 |
| User | Filename | File Type | Date Added |
|---|---|---|---|
| SMC Bot | GCF_000016425.1.fna
(5.0 MB) |
Nucleotide Fasta | May 22, 2023 04:11:59 pm |
| SMC Bot | GCF_000016425.1.filtered.secmet.gff
(8.5 MB) |
GFF | May 22, 2023 04:11:59 pm |
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| BGC ID | Compound Name (BGC Class) | Location (contig:start-end) | Attributes |
|---|---|---|---|
| 55787 | Unknown (Polyketide, T1PKS, NRP) |
NC_009380.1:653600-706157 (52557 bp) |
BGC: 0 BGC_Class: NRP, Polyketide, T1PKS annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 55791 | Unknown (NRPS, NRP) |
NC_009380.1:736371-782884 (46513 bp) |
BGC: 1 BGC_Class: NRP, NRPS annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 55794 | Unknown (NAGGN) |
NC_009380.1:1016173-1030934 (14761 bp) |
BGC: 2 BGC_Class: NAGGN annotation_tool: antiSMASHv7.0.0beta1-67b538a9 |
| 55796 | likely(salinosporamide A) (Polyketide, T1PKS, NRP, NRPS-like, Trans-AT PKS-like) |
NC_009380.1:1131285-1243806 (112521 bp) |
BGC: 3 BGC_Class: Polyketide, NRP, T1PKS, NRPS-like, Transat-PKS-like annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 55799 | Unknown (Other, Guanidinotides) |
NC_009380.1:1957837-1989588 (31751 bp) |
BGC: 4 BGC_Class: guanidinotides, Other annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 55802 | lomaiviticin A, lomaiviticin C, lomaiviticin D, lomaiviticin E (Polyketide, T2PKS, Saccharide) |
NC_009380.1:2456535-2552676 (96141 bp) |
BGC: 5 BGC_Class: Polyketide, Saccharide, T2PKS annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 55811 | Unknown (RiPP-like) |
NC_009380.1:2580521-2591940 (11419 bp) |
BGC: 6 BGC_Class: RiPP-like annotation_tool: antiSMASHv7.0.0beta1-67b538a9 |
| 55813 | Unknown (Aminoglycoside/aminocyclitol) |
NC_009380.1:2630089-2651255 (21166 bp) |
BGC: 7 BGC_Class: amglyccycl annotation_tool: antiSMASHv7.0.0beta1-67b538a9 |
| 55816 | Unknown (Terpene, RiPP, LAP, Thiopeptide) |
NC_009380.1:2695031-2748469 (53438 bp) |
BGC: 8 BGC_Class: LAP, RiPP, terpene, thiopeptide annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 55820 | Unknown (Polyketide, T2PKS) |
NC_009380.1:2773928-2846443 (72515 bp) |
BGC: 9 BGC_Class: Polyketide, T2PKS annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 55824 | Unknown (Other, NI-siderophore) |
NC_009380.1:2861871-2890378 (28507 bp) |
BGC: 10 BGC_Class: NRPS-independent-siderophore, Other annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 55827 | sporolide A, sporolide B (NRPS, Polyketide, T1PKS, NRP, NRPS-like, Aryl polyene, RRE-containing) |
NC_009380.1:2950657-3266222 (315565 bp) |
BGC: 11 BGC_Class: arylpolyene, NRP, NRPS, NRPS-like, Polyketide, RRE-containing, T1PKS annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 55856 | Unknown (Other) |
NC_009380.1:3335905-3347682 (11777 bp) |
BGC: 12 BGC_Class: Other annotation_tool: EMERALDv0.2.4.1 |
| 55858 | Unknown (Polyketide, NRPS-like, T1PKS, NRP) |
NC_009380.1:3468422-3527192 (58770 bp) |
BGC: 13 BGC_Class: NRP, NRPS-like, Polyketide, T1PKS annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 55862 | Unknown (RiPP) |
NC_009380.1:3648846-3653125 (4279 bp) |
BGC: 14 BGC_Class: RiPP annotation_tool: EMERALDv0.2.4.1 |
| 55865 | Unknown (Polyketide) |
NC_009380.1:3875555-3884594 (9039 bp) |
BGC: 15 BGC_Class: Polyketide annotation_tool: EMERALDv0.2.4.1 |
| 55866 | Unknown (RiPP) |
NC_009380.1:4337187-4346723 (9536 bp) |
BGC: 16 BGC_Class: RiPP annotation_tool: EMERALDv0.2.4.1 |
| 55869 | Unknown (Other, Butyrolactone) |
NC_009380.1:4705943-4730572 (24629 bp) |
BGC: 17 BGC_Class: butyrolactone, Other annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 55871 | Unknown (Polyketide, T3PKS, Terpene) |
NC_009380.1:4811593-4852642 (41049 bp) |
BGC: 18 BGC_Class: Polyketide, T3PKS, Terpene annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 55873 | Unknown (NRPS, Terpene, NRP) |
NC_009380.1:4978727-5046389 (67662 bp) |
BGC: 19 BGC_Class: NRP, NRPS, terpene annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
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