SMC
Version: 1.2.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): Polyketide, T3PKS, Terpene
Source Info
Source: Salinispora tropica CNB-440 - tax_id: 369723 (SMC-4487)
Location: NC_009380.1: 4811593-4852642 (41,049 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

RefSeq
Date: May 22, 2023 04:12:07 pm

Annotation id: 267597 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 04:12:07 pm

Annotation id: 267586 download GFF for this track

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Emerald
v0.2.4.1
Date: May 22, 2023 04:12:07 pm

Annotation id: 267589 download GFF for this track

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CDDSearch
Date: May 22, 2023 04:12:07 pm

Annotation id: 267594 download GFF for this track

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InterProScan
Date: May 22, 2023 04:12:07 pm

Annotation id: 267590 download GFF for this track

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Comments (1 post)


SMC Bot
May 22, 2023 04:12:07 pm
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NC_009380.1",
    "start": "4811593",
    "end": "4852642",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "25",
    "contig_edge": "False",
    "product": "T3PKS",
    "region_number": "17",
    "rules": "(Chal_sti_synt_C or Chal_sti_synt_N)",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "NC_009380.1",
    "start": "4830016",
    "end": "4837886",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NC_009380.1_emrld_16",
    "nearest_MiBIG": "BGC0001077",
    "nearest_MiBIG_class": "Polyketide Terpene",
    "nearest_MiBIG_diceDistance": "0.231",
    "score": "0.770",
    "partial": "00"
  }
]
 
 

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