SMC
Version: 1.2.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): NRPS, Terpene, NRP
Source Info
Source: Salinispora tropica CNB-440 - tax_id: 369723 (SMC-4487)
Location: NC_009380.1: 4978727-5046389 (67,662 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

RefSeq
Date: May 22, 2023 04:12:08 pm

Annotation id: 267624 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 04:12:07 pm

Annotation id: 267600 download GFF for this track

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Emerald
v0.2.4.1
Date: May 22, 2023 04:12:07 pm

Annotation id: 267608 download GFF for this track

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CDDSearch
Date: May 22, 2023 04:12:07 pm

Annotation id: 267622 download GFF for this track

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InterProScan
Date: May 22, 2023 04:12:07 pm

Annotation id: 267609 download GFF for this track

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Comments (1 post)


SMC Bot
May 22, 2023 04:12:07 pm


 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NC_009380.1",
    "start": "4978727",
    "end": "5046389",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "26,27,28",
    "contig_edge": "False",
    "product": "NRPS,terpene",
    "region_number": "18",
    "rules": "cds(Condensation and (AMP-binding or A-OX)),(Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)",
    "tool": "antismash"
  }
]

 
 

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