SMC
Version: 1.2.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): Other, Guanidinotides
Source Info
Source: Salinispora tropica CNB-440 - tax_id: 369723 (SMC-4487)
Location: NC_009380.1: 1957837-1989588 (31,751 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

RefSeq
Date: May 22, 2023 04:12:02 pm

Annotation id: 267251 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 04:12:01 pm

Annotation id: 267242 download GFF for this track

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Emerald
v0.2.4.1
Date: May 22, 2023 04:12:01 pm

Annotation id: 267244 download GFF for this track

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CDDSearch
Date: May 22, 2023 04:12:02 pm

Annotation id: 267250 download GFF for this track

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InterProScan
Date: May 22, 2023 04:12:01 pm

Annotation id: 267245 download GFF for this track

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Comments (1 post)


SMC Bot
May 22, 2023 04:12:01 pm
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NC_009380.1",
    "start": "1957837",
    "end": "1980841",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "5",
    "contig_edge": "False",
    "product": "guanidinotides",
    "region_number": "5",
    "rules": "(pgm1 and pgm_amidino)",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "NC_009380.1",
    "start": "1961502",
    "end": "1989588",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NC_009380.1_emrld_4",
    "nearest_MiBIG": "BGC0001633",
    "nearest_MiBIG_class": "Other",
    "nearest_MiBIG_diceDistance": "0.500",
    "score": "0.480",
    "partial": "00"
  }
]
 
 

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