Source: Lactobacillus gasseri

SMC ID	652590
Type of Sequence	Whole genome sequence
NCBI Taxonomy ID	1596
Taxonomy	Superkingdom Bacteria Phylum Bacillota Class Bacilli Order Lactobacillales Family Lactobacillaceae Genus Lactobacillus
Data Source Description	GenBank
Genbank Accession ID	GCA_027153285.1
Project Description	Lactobacillus gasseri, whole genome sequence - NCBI GenBank
Assembly Size	1,962,475 bp
Scaffolds	56
GC Content	34.75%
BGC Count	6

Source and Analysis Files

User	Filename	File Type	Date Added
SMC Bot	GCA_027153285.1.fna   (1.9 MB)	Nucleotide Fasta	Aug 06, 2023 05:09:05 am
SMC Bot	GCA_027153285.1.filtered.secmet.gff   (3.5 MB)	GFF	Aug 06, 2023 05:09:05 am

Biosynthetic Gene Clusters

Scale: grey bars are 1,000,000 bp.

NRPS

PKS

RiPP

Terpene

Alkaloid

Saccharide

Other

Hybrid

Unknown

Add New BGC

BGC ID	Compound Name (BGC Class)	Location (contig:start-end)	Attributes
6611682	Unknown (Saccharide)	JAKHQZ010000001.1:53237-92386 (39149 bp)	BGC: 0 BGC_Class: Saccharide annotation_tool: EMERALDv0.2.4.1
6611683	Unknown (RiPP)	JAKHQZ010000005.1:79314-82606 (3292 bp)	BGC: 1 BGC_Class: RiPP annotation_tool: EMERALDv0.2.4.1
6611684	gassericin T (RiPP-like, RiPP)	JAKHQZ010000011.1:1-11893 (11892 bp)	BGC: 2 BGC_Class: RiPP, RiPP-like annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1
6611685	Unknown (RiPP)	JAKHQZ010000014.1:26855-34150 (7295 bp)	BGC: 3 BGC_Class: RiPP annotation_tool: EMERALDv0.2.4.1
6611687	Unknown (RiPP)	JAKHQZ010000030.1:1-7442 (7441 bp)	BGC: 4 BGC_Class: RiPP annotation_tool: EMERALDv0.2.4.1
6611688	acidocin B (RiPP-like)	JAKHQZ010000037.1:1-1805 (1804 bp)	BGC: 5 BGC_Class: RiPP-like annotation_tool: antiSMASHv7.0.0beta1-67b538a9