SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): RiPP
Source Info
Source: Lactobacillus gasseri - tax_id: 1596 (SMC-652590)
Location: JAKHQZ010000014.1: 26855-34150 (7,295 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

GenBank
Date: Aug 06, 2023 05:09:06 am

Annotation id: 30764461 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: Aug 06, 2023 05:09:06 am

Annotation id: 30764457 download GFF for this track

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Emerald
v0.2.4.1
Date: Aug 06, 2023 05:09:06 am

Annotation id: 30764458 download GFF for this track

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CDDSearch
Date: Aug 06, 2023 05:09:06 am

Annotation id: 30764460 download GFF for this track

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InterProScan
Date: Aug 06, 2023 05:09:06 am

Annotation id: 30764459 download GFF for this track

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Comments (1 post)


SMC Bot
Aug 06, 2023 05:09:06 am
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "JAKHQZ010000014.1",
    "start": "26855",
    "end": "34150",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "JAKHQZ010000014.1_emrld_1",
    "nearest_MiBIG": "BGC0000546",
    "nearest_MiBIG_class": "RiPP",
    "nearest_MiBIG_diceDistance": "0.600",
    "score": "0.500",
    "partial": "00"
  }
]
 
 

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