Source: Pseudomonas aeruginosa| SMC ID | 1836 | ||||||||||||
| Type of Sequence | Whole genome sequence | ||||||||||||
| NCBI Taxonomy ID | 287  |
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| Taxonomy |
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| Data Source Description | RefSeq | ||||||||||||
| RefSeq Accession ID | GCF_009799985.1 |
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| Project Description | Pseudomonas aeruginosa, whole genome sequence - NCBI Reference Sequence Database | ||||||||||||
| Assembly Size | 6,264,398 bp | ||||||||||||
| Scaffolds | 1 | ||||||||||||
| GC Content | 66.42% | ||||||||||||
| BGC Count | 19 |
| User | Filename | File Type | Date Added |
|---|---|---|---|
| SMC Bot | GCF_009799985.1.fna
(6.0 MB) |
Nucleotide Fasta | May 22, 2023 03:07:04 pm |
| SMC Bot | GCF_009799985.1.filtered.secmet.gff
(10.3 MB) |
GFF | May 22, 2023 03:07:04 pm |
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| BGC ID | Compound Name (BGC Class) | Location (contig:start-end) | Attributes |
|---|---|---|---|
| 27020 | Unknown (Other) |
NZ_CP047061.1:1073288-1087098 (13810 bp) |
BGC: 0 BGC_Class: Other annotation_tool: EMERALDv0.2.4.1 |
| 27022 | Unknown (Beta-lactone containing protease inhibitor, NRPS-like, NRP) |
NZ_CP047061.1:1302700-1343377 (40677 bp) |
BGC: 1 BGC_Class: betalactone, NRP, NRPS-like annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 27024 | Unknown (Homoserine lactone) |
NZ_CP047061.1:1549885-1569711 (19826 bp) |
BGC: 2 BGC_Class: hserlactone annotation_tool: antiSMASHv7.0.0beta1-67b538a9 |
| 27029 | Unknown (Polyketide) |
NZ_CP047061.1:1751677-1753421 (1744 bp) |
BGC: 3 BGC_Class: Polyketide annotation_tool: EMERALDv0.2.4.1 |
| 27030 | Unknown (Phenazine, Other, Thiopeptide) |
NZ_CP047061.1:2054912-2116451 (61539 bp) |
BGC: 4 BGC_Class: Other, phenazine, thiopeptide annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 27034 | Unknown (Redox cofactor) |
NZ_CP047061.1:2162918-2185062 (22144 bp) |
BGC: 5 BGC_Class: redox-cofactor annotation_tool: antiSMASHv7.0.0beta1-67b538a9 |
| 27037 | Unknown (Saccharide) |
NZ_CP047061.1:2448574-2472909 (24335 bp) |
BGC: 6 BGC_Class: Saccharide annotation_tool: EMERALDv0.2.4.1 |
| 27042 | Unknown (Other) |
NZ_CP047061.1:2480850-2500344 (19494 bp) |
BGC: 7 BGC_Class: Other annotation_tool: EMERALDv0.2.4.1 |
| 27044 | L-2-amino-4-methoxy-trans-3-butenoic acid (NRPS, NRP) |
NZ_CP047061.1:2513185-2564079 (50894 bp) |
BGC: 8 BGC_Class: NRP, NRPS annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 27054 | Unknown (NRPS, NRP) |
NZ_CP047061.1:2564270-2739726 (175456 bp) |
BGC: 9 BGC_Class: NRP, NRPS annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 27059 | Unknown (Polyketide, NRPS) |
NZ_CP047061.1:3710737-3757581 (46844 bp) |
BGC: 10 BGC_Class: NRPS, Polyketide annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 27062 | Unknown (NAGGN) |
NZ_CP047061.1:3860885-3875645 (14760 bp) |
BGC: 11 BGC_Class: NAGGN annotation_tool: antiSMASHv7.0.0beta1-67b538a9 |
| 27064 | Unknown (Homoserine lactone) |
NZ_CP047061.1:3879127-3899732 (20605 bp) |
BGC: 12 BGC_Class: hserlactone annotation_tool: antiSMASHv7.0.0beta1-67b538a9 |
| 27066 | Unknown (RiPP) |
NZ_CP047061.1:4119259-4124774 (5515 bp) |
BGC: 13 BGC_Class: RiPP annotation_tool: EMERALDv0.2.4.1 |
| 27068 | Unknown (NRPS-like, NRP) |
NZ_CP047061.1:4535823-4585879 (50056 bp) |
BGC: 14 BGC_Class: NRP, NRPS-like annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 27074 | Unknown (RiPP) |
NZ_CP047061.1:4630365-4636288 (5923 bp) |
BGC: 15 BGC_Class: RiPP annotation_tool: EMERALDv0.2.4.1 |
| 27075 | likely(pyochelin) (NRP-metallophore, NRPS, NRP) |
NZ_CP047061.1:4676272-4765114 (88842 bp) |
BGC: 16 BGC_Class: NRP, NRP-metallophore, NRPS annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1 |
| 27080 | Unknown (Opine-like metallophore) |
NZ_CP047061.1:5415587-5437676 (22089 bp) |
BGC: 17 BGC_Class: opine-like-metallophore annotation_tool: antiSMASHv7.0.0beta1-67b538a9 |
| 27082 | Unknown (Saccharide) |
NZ_CP047061.1:6135703-6150315 (14612 bp) |
BGC: 18 BGC_Class: Saccharide annotation_tool: EMERALDv0.2.4.1 |
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