SMC
Version: 1.3.0
 
Login

BGC Info
Compound Name: Unknown
BGC Class(es): Other
Source Info
Source: Pseudomonas aeruginosa - tax_id: 287 (SMC-1836)
Location: NZ_CP047061.1: 2480850-2500344 (19,494 bp) download BGC sequence

Login to upload an annotation

Scale: Bars are 1000 base pairs              

RefSeq
Date: May 22, 2023 03:07:06 pm

Annotation id: 129723 download GFF for this track

Hide

antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 03:07:06 pm

Annotation id: 129711 download GFF for this track

Hide

Emerald
v0.2.4.1
Date: May 22, 2023 03:07:06 pm

Annotation id: 129715 download GFF for this track

Hide

CDDSearch
Date: May 22, 2023 03:07:06 pm

Annotation id: 129720 download GFF for this track

Hide

InterProScan
Date: May 22, 2023 03:07:06 pm

Annotation id: 129716 download GFF for this track

Hide

           

Comments (1 post)


SMC Bot
May 22, 2023 03:07:06 pm


 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NZ_CP047061.1",
    "start": "2480850",
    "end": "2500344",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NZ_CP047061.1_emrld_6",
    "nearest_MiBIG": "BGC0000923",
    "nearest_MiBIG_class": "Other",
    "nearest_MiBIG_diceDistance": "0.397",
    "score": "0.660",
    "partial": "00"
  }
]

 
 

   login to post or reply to a comment