SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): Saccharide
Source Info
Source: Pseudomonas aeruginosa - tax_id: 287 (SMC-1836)
Location: NZ_CP047061.1: 2448574-2472909 (24,335 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

RefSeq
Date: May 22, 2023 03:07:06 pm

Annotation id: 129705 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 03:07:06 pm

Annotation id: 129690 download GFF for this track

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Emerald
v0.2.4.1
Date: May 22, 2023 03:07:06 pm

Annotation id: 129697 download GFF for this track

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CDDSearch
Date: May 22, 2023 03:07:06 pm

Annotation id: 129702 download GFF for this track

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InterProScan
Date: May 22, 2023 03:07:06 pm

Annotation id: 129699 download GFF for this track

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Comments (1 post)


SMC Bot
May 22, 2023 03:07:06 pm
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NZ_CP047061.1",
    "start": "2448574",
    "end": "2472909",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NZ_CP047061.1_emrld_5",
    "nearest_MiBIG": "BGC0001589",
    "nearest_MiBIG_class": "Saccharide",
    "nearest_MiBIG_diceDistance": "0.578",
    "score": "0.540",
    "partial": "00"
  }
]
 
 

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