Source: Salmonella enterica subsp. enterica serovar Infantis

SMC ID	1337272
Type of Sequence	Whole genome sequence
NCBI Taxonomy ID	595
Taxonomy	Superkingdom Bacteria Phylum Pseudomonadota Class Gammaproteobacteria Order Enterobacterales Family Enterobacteriaceae Genus Salmonella Species Salmonella enterica
Data Source Description	GenBank
Genbank Accession ID	GCA_029584205.1
Project Description	Salmonella enterica subsp. enterica serovar Infantis, whole genome sequence - NCBI GenBank
Assembly Size	4,965,416 bp
Scaffolds	241
GC Content	52.35%
BGC Count	11

Source and Analysis Files

User	Filename	File Type	Date Added
SMC Bot	GCA_029584205.1.fna   (4.8 MB)	Nucleotide Fasta	Nov 21, 2023 01:32:10 am
SMC Bot	GCA_029584205.1.filtered.secmet.gff   (9.4 MB)	GFF	Nov 21, 2023 01:32:10 am

Biosynthetic Gene Clusters

Scale: grey bars are 10,000 basepairs.

NRPS

PKS

RiPP

Terpene

Alkaloid

Saccharide

Other

Hybrid

Unknown

Add New BGC

BGC ID	Compound Name (BGC Class)	Location (contig:start-end)	Attributes
13103473	Unknown (Thiopeptide)	ABLIZR010000004.1:68578-96361 (27783 bp)	BGC: 0 BGC_Class: thiopeptide annotation_tool: antiSMASHv7.0.0beta1-67b538a9
13103474	Unknown (Saccharide)	ABLIZR010000006.1:86542-94076 (7534 bp)	BGC: 1 BGC_Class: Saccharide annotation_tool: EMERALDv0.2.4.1
13103475	Unknown (NRP)	ABLIZR010000008.1:41893-52615 (10722 bp)	BGC: 2 BGC_Class: NRP annotation_tool: EMERALDv0.2.4.1
13103476	Unknown (Saccharide)	ABLIZR010000022.1:17197-33085 (15888 bp)	BGC: 3 BGC_Class: Saccharide annotation_tool: EMERALDv0.2.4.1
13103477	Unknown (Saccharide)	ABLIZR010000024.1:255-26173 (25918 bp)	BGC: 4 BGC_Class: Saccharide annotation_tool: EMERALDv0.2.4.1
13103478	Unknown (Other)	ABLIZR010000034.1:2711-24096 (21385 bp)	BGC: 5 BGC_Class: Other annotation_tool: EMERALDv0.2.4.1
13103479	Unknown (NRPS, NRP, NRP-metallophore)	ABLIZR010000039.1:56-42542 (42486 bp)	BGC: 6 BGC_Class: NRP, NRP-metallophore, NRPS annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1
13103480	Unknown (Alkaloid)	ABLIZR010000053.1:20752-32499 (11747 bp)	BGC: 7 BGC_Class: Alkaloid annotation_tool: EMERALDv0.2.4.1
13103481	Unknown (NRPS, NRP)	ABLIZR010000075.1:1-22806 (22805 bp)	BGC: 8 BGC_Class: NRP, NRPS annotation_tool: antiSMASHv7.0.0beta1-67b538a9, EMERALDv0.2.4.1
13103482	Unknown (RiPP)	ABLIZR010000131.1:556-8106 (7550 bp)	BGC: 9 BGC_Class: RiPP annotation_tool: EMERALDv0.2.4.1
13103483	Unknown (Saccharide)	ABLIZR010000236.1:58-5213 (5155 bp)	BGC: 10 BGC_Class: Saccharide annotation_tool: EMERALDv0.2.4.1