SMC
Version: 1.1.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): nrp-metallophore, nrp, nrps
Source Info
Source: Salmonella enterica subsp. enterica serovar Infantis - tax_id: 595 (SMC-1337272)
Location: ABLIZR010000039.1: 56-42542 (42,486 bp)

Scale: Bars are 1000 base pairs              

GenBank
Date: Nov 21, 2023 01:32:11 am

Annotation id: 61583138

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antiSMASH
v7.0.0beta1-67b538a9
Date: Nov 21, 2023 01:32:11 am

Annotation id: 61583134

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Emerald
v0.2.4.1
Date: Nov 21, 2023 01:32:11 am

Annotation id: 61583135

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CDDSearch
Date: Nov 21, 2023 01:32:11 am

Annotation id: 61583137

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InterProScan
Date: Nov 21, 2023 01:32:11 am

Annotation id: 61583136

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Comments (1 post)


SMC Bot
Nov 21, 2023 01:32:11 am


 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "ABLIZR010000039.1",
    "start": "56",
    "end": "42542",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "1",
    "contig_edge": "True",
    "product": "NRPS,NRP-metallophore",
    "region_number": "1",
    "rules": "cds(Condensation and (AMP-binding or A-OX)),(VibH_like or Cy_tandem or (cds(Condensation and AMP-binding) and ((IBH_Asp and not SBH_Asp) or IBH_His or TBH_Asp or CyanoBH_Asp1 or CyanoBH_Asp2 or IPL or SalSyn or (EntA and EntC) or (GrbD and GrbE) or (FbnL and FbnM) or PvdO or PvdP or (Orn_monoox and not (KtzT or MetRS-like)) or Lys_monoox or VbsL)))",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "ABLIZR010000039.1",
    "start": "13957",
    "end": "42471",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "ABLIZR010000039.1_emrld_1",
    "nearest_MiBIG": "BGC0000454",
    "nearest_MiBIG_class": "NRP",
    "nearest_MiBIG_diceDistance": "0.409",
    "score": "0.900",
    "partial": "01"
  }
]

 
 

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