SMC
Version: 1.1.0
 
Login

BGC Info
Compound Name: Unknown
BGC Class(es): nrp, nrps
Source Info
Source: Salmonella enterica subsp. enterica serovar Infantis - tax_id: 595 (SMC-1337272)
Location: ABLIZR010000075.1: 1-22806 (22,805 bp)

Scale: Bars are 1000 base pairs              

GenBank
Date: Nov 21, 2023 01:32:12 am

Annotation id: 61583148

Hide

antiSMASH
v7.0.0beta1-67b538a9
Date: Nov 21, 2023 01:32:12 am

Annotation id: 61583144

Hide

Emerald
v0.2.4.1
Date: Nov 21, 2023 01:32:12 am

Annotation id: 61583145

Hide

CDDSearch
Date: Nov 21, 2023 01:32:12 am

Annotation id: 61583147

Hide

InterProScan
Date: Nov 21, 2023 01:32:12 am

Annotation id: 61583146

Hide

           

Comments (1 post)


SMC Bot
Nov 21, 2023 01:32:12 am
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "ABLIZR010000075.1",
    "start": "1",
    "end": "22806",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "1",
    "contig_edge": "True",
    "product": "NRPS",
    "region_number": "1",
    "rules": "cds(Condensation and (AMP-binding or A-OX))",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "ABLIZR010000075.1",
    "start": "18",
    "end": "22464",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "ABLIZR010000075.1_emrld_1",
    "nearest_MiBIG": "BGC0000467",
    "nearest_MiBIG_class": "NRP",
    "nearest_MiBIG_diceDistance": "0.188",
    "score": "0.990",
    "partial": "11"
  }
]
 
 

   login to post or reply to a comment