SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): Thiopeptide
Source Info
Source: Salmonella enterica subsp. enterica serovar Infantis - tax_id: 595 (SMC-1337272)
Location: ABLIZR010000004.1: 68578-96361 (27,783 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

GenBank
Date: Nov 21, 2023 01:32:10 am

Annotation id: 61583108 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: Nov 21, 2023 01:32:10 am

Annotation id: 61583105 download GFF for this track

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CDDSearch
Date: Nov 21, 2023 01:32:10 am

Annotation id: 61583107 download GFF for this track

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InterProScan
Date: May 24, 2024 06:40:51 am

Annotation id: 61583106 download GFF for this track

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Comments (1 post)


SMC Bot
Nov 21, 2023 01:32:10 am
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "ABLIZR010000004.1",
    "start": "68578",
    "end": "96361",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "1",
    "contig_edge": "False",
    "product": "thiopeptide",
    "region_number": "1",
    "rules": "((YcaO or TIGR03604) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)",
    "tool": "antismash"
  }
]
 
 

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