SMC
Version: 1.3.0
 
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Source: Streptococcus pyogenes


SMC ID 25648
Type of Sequence Whole genome sequence
NCBI Taxonomy ID 1314
Taxonomy
SuperkingdomBacteria
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
Data Source Description RefSeq
RefSeq Accession ID GCF_020827075.1
Project Description Streptococcus pyogenes, whole genome sequence - NCBI Reference Sequence Database
Assembly Size 1,890,384 bp
Scaffolds 1
GC Content 38.44%
BGC Count 5



Source and Analysis Files
UserFilenameFile TypeDate Added
SMC Bot GCF_020827075.1.fna  
(1.8 MB)
Nucleotide Fasta May 23, 2023 01:23:30 am
SMC Bot GCF_020827075.1.filtered.secmet.gff  
(2.7 MB)
GFF May 23, 2023 01:23:31 am


Biosynthetic Gene Clusters

Scale: grey bars are 1,000,000 bp.

  
NRPS
  
PKS
  
RiPP
  
Terpene
  
Alkaloid
  
Saccharide
  
Other
  
Hybrid
  
Unknown



BGC IDCompound Name (BGC Class)Location (contig:start-end)Attributes
283728 Unknown
(Polyketide)
NZ_CP060646.1:403693-408246
(4553 bp)
BGC: 0
BGC_Class: Polyketide
annotation_tool: EMERALDv0.2.4.1
283729 Unknown
(RiPP)
NZ_CP060646.1:1035847-1044635
(8788 bp)
BGC: 1
BGC_Class: RiPP
annotation_tool: EMERALDv0.2.4.1
283730 Unknown
(RiPP)
NZ_CP060646.1:1274128-1294059
(19931 bp)
BGC: 2
BGC_Class: RiPP
annotation_tool: EMERALDv0.2.4.1
283731 likely(streptococcin A-FF22)
(RiPP)
NZ_CP060646.1:1384289-1403134
(18845 bp)
BGC: 3
BGC_Class: RiPP
annotation_tool: EMERALDv0.2.4.1
283732 likely(salivaricin A)
(RiPP)
NZ_CP060646.1:1598142-1610420
(12278 bp)
BGC: 4
BGC_Class: RiPP
annotation_tool: EMERALDv0.2.4.1

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