SMC
Version: 1.3.0
 
Login

BGC Info
Compound Name: Unknown
BGC Class(es): RiPP
Source Info
Source: Streptococcus pyogenes - tax_id: 1314 (SMC-25648)
Location: NZ_CP060646.1: 1274128-1294059 (19,931 bp) download BGC sequence

Login to upload an annotation

Scale: Bars are 1000 base pairs              

RefSeq
Date: May 23, 2023 01:23:31 am

Annotation id: 1359270 download GFF for this track

Hide

Emerald
v0.2.4.1
Date: May 23, 2023 01:23:31 am

Annotation id: 1359267 download GFF for this track

Hide

CDDSearch
Date: May 23, 2023 01:23:31 am

Annotation id: 1359269 download GFF for this track

Hide

InterProScan
Date: May 23, 2023 01:23:31 am

Annotation id: 1359268 download GFF for this track

Hide

           

Comments (1 post)


SMC Bot
May 23, 2023 01:23:31 am
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NZ_CP060646.1",
    "start": "1274128",
    "end": "1294059",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NZ_CP060646.1_emrld_3",
    "nearest_MiBIG": "BGC0001170",
    "nearest_MiBIG_class": "RiPP",
    "nearest_MiBIG_diceDistance": "0.364",
    "score": "0.990",
    "partial": "00"
  }
]
 
 

   login to post or reply to a comment