SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): Polyketide, T1PKS, NRP, NRPS-like
Source Info
Source: Salinispora tropica CNT250 - tax_id: 1169196 (SMC-219220)
Location: KK211121.1: 52941-108836 (55,895 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

GenBank
Date: Jun 08, 2023 03:39:48 pm

Annotation id: 12477737 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: Jun 08, 2023 03:39:48 pm

Annotation id: 12477733 download GFF for this track

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Emerald
v0.2.4.1
Date: Jun 08, 2023 03:39:48 pm

Annotation id: 12477734 download GFF for this track

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CDDSearch
Date: Jun 08, 2023 03:39:48 pm

Annotation id: 12477736 download GFF for this track

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InterProScan
Date: Jun 08, 2023 03:39:48 pm

Annotation id: 12477735 download GFF for this track

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Comments (1 post)


SMC Bot
Jun 08, 2023 03:39:48 pm
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "KK211121.1",
    "start": "52941",
    "end": "108836",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "KK211121.1_emrld_1",
    "nearest_MiBIG": "BGC0001006",
    "nearest_MiBIG_class": "NRP Polyketide",
    "nearest_MiBIG_diceDistance": "0.291",
    "score": "0.840",
    "partial": "00"
  }
]
 
 

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