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Version: 1.2.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): Terpene
Source Info
Source: Salinispora tropica CNT250 - tax_id: 1169196 (SMC-219220)
Location: KK211117.1: 94095-115033 (20,938 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

antiSMASH
v7.0.0beta1-67b538a9
Date: Jun 08, 2023 03:39:47 pm

Annotation id: 12477712 download GFF for this track

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Emerald
v0.2.4.1
Date: Jun 08, 2023 03:39:47 pm

Annotation id: 12477715 download GFF for this track

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CDDSearch
Date: Jun 08, 2023 03:39:47 pm

Annotation id: 12477720 download GFF for this track

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InterProScan
Date: Jun 08, 2023 03:39:47 pm

Annotation id: 12477716 download GFF for this track

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Comments (1 post)


SMC Bot
Jun 08, 2023 03:39:47 pm


 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "KK211117.1",
    "start": "94095",
    "end": "115033",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "1",
    "contig_edge": "False",
    "product": "terpene",
    "region_number": "1",
    "rules": "(Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "KK211117.1",
    "start": "97077",
    "end": "113138",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "KK211117.1_emrld_1",
    "nearest_MiBIG": "BGC0000648",
    "nearest_MiBIG_class": "Terpene",
    "nearest_MiBIG_diceDistance": "0.559",
    "score": "0.530",
    "partial": "00"
  }
]

 
 

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