SMC
Version: 1.3.0
 
Login

BGC Info
Compound Name: Unknown
BGC Class(es): Aminoglycoside/aminocyclitol
Source Info
Source: Salinispora tropica CNT250 - tax_id: 1169196 (SMC-219220)
Location: JHVW01000022.1: 15149-36315 (21,166 bp) download BGC sequence

Login to upload an annotation

Scale: Bars are 1000 base pairs              

antiSMASH
v7.0.0beta1-67b538a9
Date: Jun 08, 2023 03:39:41 pm

Annotation id: 12477473 download GFF for this track

Hide

CDDSearch
Date: Jun 08, 2023 03:39:42 pm

Annotation id: 12477496 download GFF for this track

Hide

InterProScan
Date: Jun 08, 2023 03:39:42 pm

Annotation id: 12477482 download GFF for this track

Hide

           

Comments (1 post)


SMC Bot
Jun 08, 2023 03:39:41 pm
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "JHVW01000022.1",
    "start": "15149",
    "end": "36315",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "1",
    "contig_edge": "False",
    "product": "amglyccycl",
    "region_number": "1",
    "rules": "(DOIS or ValA or salQ or strH or strK1 or strK2 or NeoL or SpcFG or SpcDK_glyc)",
    "tool": "antismash"
  }
]
 
 

   login to post or reply to a comment