antiSMASH
v7.0.0beta1-67b538a9
Date: Jun 08, 2023 03:39:30 pm
Annotation id: 12476310
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Emerald
v0.2.4.1
Date: Jun 08, 2023 03:39:35 pm
Annotation id: 12476501
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CDDSearch
Date: Jun 08, 2023 03:39:38 pm
Annotation id: 12476820
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InterProScan
Date: Jun 08, 2023 03:39:35 pm
Annotation id: 12476504
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Comments (1 post)
SMC Bot Jun 08, 2023 03:39:30 pm
FlaggedHidden
This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:
[
{
"SequenceID/Contig": "JHVW01000003.1",
"start": "1",
"end": "24276",
"annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
"candidate_cluster_numbers": "1,2,3",
"contig_edge": "True",
"product": "RRE-containing,T1PKS",
"region_number": "1",
"rules": "minimum(1%2C [Bottromycin_Methyltransferase_RRE%2C Cyanobactin_D_RRE%2C Cytolysin_C_RRE%2C Goadsporin_CD_RRE%2C Heterocycloanthracin_C_RRE%2C Lanthipeptide_LanB_RRE%2C Lasso_Fused_RRE%2C Mycofactocin_RRE%2C NHLP_CD_RRE%2C Other_Sactipeptide_rSAM_RRE%2C Pantocin_Microcin_RRE%2C Plantazolicin_C_RRE%2C PlpY_RRE%2C PqqD_RRE%2C Proteusin_Epimerase_RRE%2C Proteusin_Methyltransferase_RRE%2C Quinohemoprotein_rSAM_RRE%2C Ranthipeptide_rSAM_RRE%2C Stand_Alone_Lasso_RRE%2C Streptide_RRE%2C Subtilosin_rSAM_RRE%2C Thiaglutamate_B_RRE%2C Thiaglutamate_G_RRE%2C Thiaglutamate_I_RRE%2C Thiopeptide_F_RRE%2C Thuricin_rSAM_RRE%2C Thurincin_rSAM_RRE%2C Trifolitoxin_RRE]),cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))",
"tool": "antismash"
},
{
"SequenceID/Contig": "JHVW01000003.1",
"start": "3",
"end": "166875",
"annotation_tool": "EMERALDv0.2.4.1",
"ID": "JHVW01000003.1_emrld_1",
"nearest_MiBIG": "BGC0000150",
"nearest_MiBIG_class": "NRP Polyketide",
"nearest_MiBIG_diceDistance": "0.373",
"score": "0.850",
"partial": "10"
},
{
"SequenceID/Contig": "JHVW01000003.1",
"start": "25751",
"end": "104843",
"annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
"candidate_cluster_numbers": "4,5,6",
"contig_edge": "False",
"product": "NRPS-like,T1PKS",
"region_number": "2",
"rules": "cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX)),cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))",
"tool": "antismash"
},
{
"SequenceID/Contig": "JHVW01000003.1",
"start": "106448",
"end": "157090",
"annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
"candidate_cluster_numbers": "7",
"contig_edge": "False",
"product": "NRPS,T1PKS",
"region_number": "3",
"rules": "cds(Condensation and (AMP-binding or A-OX)),cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))",
"tool": "antismash"
}
]
Comments (1 post)
SMC Bot
Jun 08, 2023 03:39:30 pm
Flagged Hidden
This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format: