SMC
Version: 1.3.0
 
Login

BGC Info
Compound Name: Unknown
BGC Class(es): Terpene
Source Info
Source: uncultured euryarchaeote - tax_id: 114243 (SMC-1359734)
Location: CAXHFX010000015.1: 1-11230 (11,229 bp) download BGC sequence

Login to upload an annotation

Scale: Bars are 1000 base pairs              

GenBank
Date: Aug 22, 2024 02:31:59 pm

Annotation id: 61847098 download GFF for this track

Hide

antiSMASH
v7.1.0
Date: Aug 22, 2024 02:31:59 pm

Annotation id: 61847094 download GFF for this track

Hide

Emerald
v0.2.4.1
Date: Aug 22, 2024 02:31:59 pm

Annotation id: 61847095 download GFF for this track

Hide

CDDSearch
Date: Aug 22, 2024 02:31:59 pm

Annotation id: 61847097 download GFF for this track

Hide

InterProScan
Date: Aug 22, 2024 02:31:59 pm

Annotation id: 61847096 download GFF for this track

Hide

           

Comments (1 post)


SMC Bot
Aug 22, 2024 02:31:59 pm


 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "CAXHFX010000015.1",
    "start": "1",
    "end": "11230",
    "annotation_tool": "antiSMASHv7.1.0",
    "candidate_cluster_numbers": "1",
    "contig_edge": "True",
    "product": "terpene",
    "region_number": "1",
    "rules": "(Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "CAXHFX010000015.1",
    "start": "3",
    "end": "10762",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "CAXHFX010000015.1_emrld_1",
    "nearest_MiBIG": "BGC0000656",
    "nearest_MiBIG_class": "Terpene",
    "nearest_MiBIG_diceDistance": "0.576",
    "score": "0.730",
    "partial": "10"
  }
]

 
 

   login to post or reply to a comment