NZ_CM000441.1	RefSeq	region	1	4094363		+		ID=NZ_CM000441.1:1..4094363;Dbxref=taxon:455631;Is_circular=true;Name=ANONYMOUS;country=Canada: Quebec;gb-synonym=Clostridium difficile QCD-66c26;gbkey=Src;genome=chromosome;isolate=QCD-66c26;isolation-source=patient with severe CDAD;mol_type=genomic DNA;nat-host=Homo sapiens;note=binary toxin positive%3B tcdC delta-117 and 18bp deletion;old-name=Clostridium difficile QCD-66c26
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	protocluster	3031165	3051308		+		aStool=rule-based-clusters;category=RiPP;contig_edge=False;core_location=[3041164:3041308];cutoff=20000;detection_rule=(TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1%2C [Bottromycin_Methyltransferase_RRE%2C Cyanobactin_D_RRE%2C Cytolysin_C_RRE%2C Goadsporin_CD_RRE%2C Heterocycloanthracin_C_RRE%2C Lanthipeptide_LanB_RRE%2C Lasso_Fused_RRE%2C Mycofactocin_RRE%2C NHLP_CD_RRE%2C Other_Sactipeptide_rSAM_RRE%2C Pantocin_Microcin_RRE%2C Plantazolicin_C_RRE%2C PlpY_RRE%2C PqqD_RRE%2C Proteusin_Epimerase_RRE%2C Proteusin_Methyltransferase_RRE%2C Quinohemoprotein_rSAM_RRE%2C Ranthipeptide_rSAM_RRE%2C Stand_Alone_Lasso_RRE%2C Streptide_RRE%2C Subtilosin_rSAM_RRE%2C Thiaglutamate_B_RRE%2C Thiaglutamate_G_RRE%2C Thiaglutamate_I_RRE%2C Thiopeptide_F_RRE%2C Thuricin_rSAM_RRE%2C Thurincin_rSAM_RRE%2C Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))));neighbourhood=10000;product=ranthipeptide;protocluster_number=5;tool=antismash
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	proto_core	3041165	3041308		+		aStool=rule-based-clusters;tool=antismash;cutoff=20000;detection_rule=(TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1%2C [Bottromycin_Methyltransferase_RRE%2C Cyanobactin_D_RRE%2C Cytolysin_C_RRE%2C Goadsporin_CD_RRE%2C Heterocycloanthracin_C_RRE%2C Lanthipeptide_LanB_RRE%2C Lasso_Fused_RRE%2C Mycofactocin_RRE%2C NHLP_CD_RRE%2C Other_Sactipeptide_rSAM_RRE%2C Pantocin_Microcin_RRE%2C Plantazolicin_C_RRE%2C PlpY_RRE%2C PqqD_RRE%2C Proteusin_Epimerase_RRE%2C Proteusin_Methyltransferase_RRE%2C Quinohemoprotein_rSAM_RRE%2C Ranthipeptide_rSAM_RRE%2C Stand_Alone_Lasso_RRE%2C Streptide_RRE%2C Subtilosin_rSAM_RRE%2C Thiaglutamate_B_RRE%2C Thiaglutamate_G_RRE%2C Thiaglutamate_I_RRE%2C Thiopeptide_F_RRE%2C Thuricin_rSAM_RRE%2C Thurincin_rSAM_RRE%2C Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))));neighbourhood=10000;product=ranthipeptide;protocluster_number=5
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	antismash_cand_cluster	3031165	3051308		+		candidate_cluster_number=6;contig_edge=False;detection_rules=(TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1%2C [Bottromycin_Methyltransferase_RRE%2C Cyanobactin_D_RRE%2C Cytolysin_C_RRE%2C Goadsporin_CD_RRE%2C Heterocycloanthracin_C_RRE%2C Lanthipeptide_LanB_RRE%2C Lasso_Fused_RRE%2C Mycofactocin_RRE%2C NHLP_CD_RRE%2C Other_Sactipeptide_rSAM_RRE%2C Pantocin_Microcin_RRE%2C Plantazolicin_C_RRE%2C PlpY_RRE%2C PqqD_RRE%2C Proteusin_Epimerase_RRE%2C Proteusin_Methyltransferase_RRE%2C Quinohemoprotein_rSAM_RRE%2C Ranthipeptide_rSAM_RRE%2C Stand_Alone_Lasso_RRE%2C Streptide_RRE%2C Subtilosin_rSAM_RRE%2C Thiaglutamate_B_RRE%2C Thiaglutamate_G_RRE%2C Thiaglutamate_I_RRE%2C Thiopeptide_F_RRE%2C Thuricin_rSAM_RRE%2C Thurincin_rSAM_RRE%2C Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))));kind=single;product=ranthipeptide;protoclusters=5;tool=antismash
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	antismash_region	3031165	3051308		+		candidate_cluster_numbers=6;contig_edge=False;product=ranthipeptide;region_number=4;rules=(TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1%2C [Bottromycin_Methyltransferase_RRE%2C Cyanobactin_D_RRE%2C Cytolysin_C_RRE%2C Goadsporin_CD_RRE%2C Heterocycloanthracin_C_RRE%2C Lanthipeptide_LanB_RRE%2C Lasso_Fused_RRE%2C Mycofactocin_RRE%2C NHLP_CD_RRE%2C Other_Sactipeptide_rSAM_RRE%2C Pantocin_Microcin_RRE%2C Plantazolicin_C_RRE%2C PlpY_RRE%2C PqqD_RRE%2C Proteusin_Epimerase_RRE%2C Proteusin_Methyltransferase_RRE%2C Quinohemoprotein_rSAM_RRE%2C Ranthipeptide_rSAM_RRE%2C Stand_Alone_Lasso_RRE%2C Streptide_RRE%2C Subtilosin_rSAM_RRE%2C Thiaglutamate_B_RRE%2C Thiaglutamate_G_RRE%2C Thiaglutamate_I_RRE%2C Thiopeptide_F_RRE%2C Thuricin_rSAM_RRE%2C Thurincin_rSAM_RRE%2C Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))));tool=antismash
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3036779	3038212		-		locus_tag=ctg1_2709;transl_table=11;translation=MKSTLGVENNMKNSKKILAIGLTLFLVMVNTPMVNALTSVEQIKGNDRYETAAKIADKQNYNTAILINSDNSLADGLSASGLAGALNAPILMTKQNQIPNTTMERLNKAKTVYIIGSESTISKNVENQLLSKKKVVQRIFGENRFDTSIKIAEKIKEIKPIDKVIIANGFTGEADAISASPVAARDGVPIILIDGNSVGFDTTGLKSYALGSSEIISDELVKSTNSIRLGGTDRFETNKIVIQEFYKNSKEFYLSKGLQLTDALVASTIAKNAPVVLVENGSNKSILSGADKLTVLGGINQNVIKQCINQASPNQQGLYYNPNDRAFKERIKGKVYALTKQYRKDNGVRALSVASRLEGLANDWSNLMANKKTLSHTINGKNSYSTFLKYLDWSEIKPGYIAVQGENIIKYKISDKPVYTNRDADDIGNFIFNEWKTNPEEGTNMLHKGYEIMGFGIAITGDKNLYATHEFYGRYKE
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3038644	3040539		-		locus_tag=ctg1_2710;transl_table=11;translation=MLSNKKRSMAIVMAGATVMSAAAPIFADNTVTENVDKNYTVSAKDSAKLIEEVRKALEVKFEDTKAGANVNDRVYDIKVDNVNLTNATQLQNKINSLTEGQSLKVTIQDKGHQVLGGKVVDYKIENYKTAQEIVDAVNAYNATLAEDSDNKLTATIKSTNTVEVKRAKDSANVITLNVGDQHLDFSKVITSEEGTFEGYEKSYSDIDSKELHTITVKNADLQDISAEELFDGIRLTTLGREIVNKVKNGYALTFENEAILTQEQEDSDDKDKPEKSSFDIVLSKANEKSETISVSSKNHKLVRDLHKVLTDVKDGKELKVEVLSGDSRFTTAVEVSKERFKDGEAEAIILVGEDAIVDGLASAPLASQKNAPILLSKKDSLPSEIEAEILRVLGSNLSSKKIYIVGGESKVSKETEEKLSKLGVSKVERVSGEDRFETSLEIAKQLKDTFKTAFVVGGNGEADAMSISARAAQFGAPIIVTGNELDANAEKLLKGKELEIVGGENSVSKEVEDKLVDIDLNNKVERLAGENRKDTNAKVINKYYAGATKAYVAKDGYVGGNGQLVDALTAAPLAASSKAPIVLTTEELSKSQEEVVELRLKNATKLVQIGEGIAKNAIEKIAEKINLFTKN
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3041165	3041308		-		gene_functions=biosynthetic (rule-based-clusters) ranthipeptide: SCIFF,biosynthetic (rule-based-clusters) ranthipeptide: TIGR03973;gene_kind=biosynthetic;locus_tag=ctg1_2711;sec_met_domain=TIGR03973 (E-value: 7.4e-24%2C bitscore: 81.1%2C seeds: 43%2C tool: rule-based-clusters),SCIFF (E-value: 2.2e-24%2C bitscore: 82.8%2C seeds: 43%2C tool: rule-based-clusters);transl_table=11;translation=MENKHVKTLSQATLKQSAAKGGCGECQTSCQSACKTSCTVANQECER
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3041374	3041736		-		locus_tag=ctg1_2712;transl_table=11;translation=MGKSNYIFKGLGYAYIITLAVLLVYNLFLTFTDIGGDNITMVSSFITTISAAIGGFYTSKHMKEKGLMYGLLVGLLYIVCIFLTVFLAQEKFVFEVGMIYKLLLISAAGGIGGVLGVNFK
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3041794	3042087		-		locus_tag=ctg1_2713;transl_table=11;translation=MPQQQIIMSIGLWVVVIAIFYFLMIRPQKKKDKQLKEMRSSLSVGDKVITIGGIVANVAKVEDDVVILELGPNRTKVPFEKWAIGTVKSKKEEIEED
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3042221	3043342		-		locus_tag=ctg1_2714;transl_table=11;translation=MYAVRYELIKTCKQSGARLGRLHTPHGIIETPIFMPVGTQATVKSMTPEELKEIGSQIILSNTYHLYMRPGHELIKRAGGLHKFMNWDKPILTDSGGFQVFSLGPLRKIKEEGVEFRSHLDGSKHFLTPEKAMEIQNALGSDIMMAFDECAPYPSDREYVKNSLERTTRWLKRCKDAHNNTDKQALFGIIQGGMYKDLREQSAKEITSIDLPGYAIGGLSVGEPKPLMYDVLEHTTPLMPQDKPRYLMGVGSPDDLVEGVIRGVDMFDCVLPTRIARNGTAMTSQGKVVVRNATYAEDFTPLDPECDCYACKNYSRAYIRHLIKANEILGARLITTHNLHFLLNLMKQIRQAIMEDRLLDFRNEFFAKYGYEI
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3043421	3043906		-		locus_tag=ctg1_2715;transl_table=11;translation=MHSLQKQKKNNPILKIAFIFERVLAVVVLIAVFLGTIDVLRLMWGAYIVDFQNPVQYSQLNDFLAQILLLVIGVELVVMLSLHIPGAFIEALLYAIARKMLLLPKNEGMIDVLIGVIAIAGLFAIKKFLVTKDKSALNIMSIHDEEAIKEQQNKEDEDKSI
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3043918	3044943		-		locus_tag=ctg1_2716;transl_table=11;translation=LKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGNIEHKVFRDIIEYLNPGDCLVLNNTRVIPARLIGEKLETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSFGNGKLIGEVVDLSDEGSRIIKFLYDGIFEEILDELGNMPLPPYITARLDEKERYQTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKMHSEYYMVSQEAADKINRAKENGNNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPGYKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMIIK
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3045261	3046280		-		locus_tag=ctg1_2717;transl_table=11;translation=MQGFEDENRIITSTMKMEDIDIENSLRPKTLEDYLGQEKSKEQLSIFIEAAKSRNEQLDHVLLYGPPGLGKTTLASIIANEMGVNLRITSGPAIERAGDLAAILTNLNENDVLFIDEIHRINRSVEEVLYPAMEDFCLDIIIGKGPSARSIRLDLPKFTLIGATTRAGMLTNPLRDRFGVICKLDYYTVDELSKIVLRSSSILDAEIQSNGALELAKRSRGTPRIANRLLKRVRDFAQVRADGKITDKVAKDALELLGVDSLGLDFVDEKLLMTIIEKFRGGPVGLDTLAASIGEDRNTIEDVYEPYLLQLGFINRGPRGRVAMPLAYEHLKIPYPNEK
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3046387	3046989		-		locus_tag=ctg1_2718;transl_table=11;translation=MYSYIKGTVEEIYIDSIVVENNGIGYKINVSSNTIMNLQVGEATKIYTKLIVREDDMSLCGFVSREELKMFELLTSVSKIGPKVALSILSFASSAQLGAYILSEDIGKLSKAPGVGKKTAERIVLELKDKVDKNNIEFEPTLLSQKPTLISQDESVDALVALGYTLSESKEAVQKCKKDGMNTEAIIKKALTYIMSKSLK
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3046982	3047491		-		locus_tag=ctg1_2719;transl_table=11;translation=MIILGIDPGIAIVGYGIIEYKNSKFKVIDYGAVTTPAHMNISRRLELVYKGIDTIVKNYNIDEVGMEELFFNKNVKTAITVAQARGVTMLACAHNGKPVYEYTPLQVKQGVVGYGRADKAQVQQMVTSFLSLKKVPKPDDVADALAVAICHAHSNKLEKTLKNIGGKYV
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3047803	3048432		-		locus_tag=ctg1_2720;transl_table=11;translation=MFEKKKKELFPWKISALILVGVFVLSSGVYIGTRLKNNGVQTSKVVSASANMDEKSKEAFGLNKNCEVWLQSEGENETNYKRTLTMAGIVPESLLDKTKSEIVSYFKKEYPTKKIKSMDKNEIILVESKYSDNKDVQAMNATIKGKYTIENDNGNIALYKYDDSGSKTLVEKTKIRVDSLPKTVQDEIKKGVVMDTEEEAYSRLEDFAS
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3048635	3048958		+		locus_tag=ctg1_2721;transl_table=11;translation=LERINCNVINCSHNNSHICYADKIFINGEKAHNDRHTCCSSFLDESIYSNLSSNVNNRNCEELVCTVKNCKYNKDGSLCTLDNILVAPETDRVNLYIETCCSSFECK
NZ_CM000441.1	antiSMASHv7.0.0beta1-67b538a9	CDS	3049226	3050080		+		locus_tag=ctg1_2722;transl_table=11;translation=MSTFYIQFLYFVIYSFIGWCCETTYCSVLQKQFVNRGFLNGPFCPIYGFGALAIVATLTPFVHNIPLLFLFSIIITSIMEYCTSFILEKIFNMTWWDYSKHKFNIHGRVCLENSLMFGVLSLIVMLIVHPIVVDFINSISKNVLFIFAISIEIYFVLDLVITVHTILQLNGKLKQINLIIKELKDKKEYYKLITQETIENKLESLVENRLDTLEDRFEILKEKENYRYAKNRIDELKNKLNTLLSNHKLLHRRIIKAFPNISSNKHTDILNKIKENIKSIKKDK