NZ_CM000441.1 RefSeq region 1 4094363 + ID=NZ_CM000441.1:1..4094363;Dbxref=taxon:455631;Is_circular=true;Name=ANONYMOUS;country=Canada: Quebec;gb-synonym=Clostridium difficile QCD-66c26;gbkey=Src;genome=chromosome;isolate=QCD-66c26;isolation-source=patient with severe CDAD;mol_type=genomic DNA;nat-host=Homo sapiens;note=binary toxin positive%3B tcdC delta-117 and 18bp deletion;old-name=Clostridium difficile QCD-66c26 NZ_CM000441.1 InterProScan domain 2966966 2967720 1.4E-39 - . interpro_accession=IPR006741;description=Accessory gene regulator B;date_run=23-03-2023;length=192;analysis=Pfam:PF04647;pfam_description=Accessory gene regulator B NZ_CM000441.1 InterProScan domain 2973203 2973548 3.3E-31 - . interpro_accession=IPR035895;description=HPr-like superfamily;date_run=23-03-2023;length=86;analysis=Gene3D:G3DSA:3.30.1340.10;gene3d_description=- NZ_CM000441.1 InterProScan domain 2973204 2973543 3.3E-30 - . interpro_accession=IPR000032;description=Phosphocarrier protein HPr-like;date_run=23-03-2023;length=86;analysis=Pfam:PF00381;pfam_description=PTS HPr component phosphorylation site NZ_CM000441.1 InterProScan domain 2973214 2973490 1.3E-19 - . interpro_accession=IPR000032;description=Phosphocarrier protein HPr-like;date_run=23-03-2023;length=86;analysis=PRINTS:PR00107;prints_description=Phosphocarrier protein signature NZ_CM000441.1 InterProScan domain 2973254 2973531 1.3E-19 - . interpro_accession=IPR000032;description=Phosphocarrier protein HPr-like;date_run=23-03-2023;length=86;analysis=PRINTS:PR00107;prints_description=Phosphocarrier protein signature NZ_CM000441.1 InterProScan domain 2973239 2973514 1.3E-19 - . interpro_accession=IPR000032;description=Phosphocarrier protein HPr-like;date_run=23-03-2023;length=86;analysis=PRINTS:PR00107;prints_description=Phosphocarrier protein signature NZ_CM000441.1 InterProScan domain 2973204 2973543 4.8E-29 - . interpro_accession=IPR000032;description=Phosphocarrier protein HPr-like;date_run=23-03-2023;length=86;analysis=TIGRFAM:TIGR01003;tigrfam_description=PTS_HPr_family: phosphocarrier%2C HPr family NZ_CM000441.1 InterProScan domain 2973240 2973515 - - . interpro_accession=IPR002114;description=Phosphotransferase system%2C HPr serine phosphorylation site;date_run=23-03-2023;length=86;analysis=ProSitePatterns:PS00589;prositepatterns_description=PTS HPR domain serine phosphorylation site signature. NZ_CM000441.1 InterProScan domain 2962704 2964610 1.1E-78 - . interpro_accession=IPR004147;description=ABC1 atypical kinase-like domain;date_run=23-03-2023;length=554;analysis=Pfam:PF03109;pfam_description=ABC1 atypical kinase-like domain NZ_CM000441.1 InterProScan domain 2962723 2964601 5.6E-7 - . interpro_accession=-;description=-;date_run=23-03-2023;length=554;analysis=Gene3D:G3DSA:1.10.510.10;gene3d_description=Transferase(Phosphotransferase) domain 1 NZ_CM000441.1 InterProScan domain 2973658 2975054 1.4E-21 - . interpro_accession=IPR002641;description=Patatin-like phospholipase domain;date_run=23-03-2023;length=403;analysis=Pfam:PF01734;pfam_description=Patatin-like phospholipase NZ_CM000441.1 InterProScan domain 2973655 2975005 4.2E-24 - . interpro_accession=-;description=-;date_run=23-03-2023;length=403;analysis=Gene3D:G3DSA:3.40.1090.10;gene3d_description=Cytosolic phospholipase A2 catalytic domain NZ_CM000441.1 InterProScan domain 2956252 2957042 3.2E-27 - . interpro_accession=IPR001279;description=Metallo-beta-lactamase;date_run=23-03-2023;length=204;analysis=Pfam:PF00753;pfam_description=Metallo-beta-lactamase superfamily NZ_CM000441.1 InterProScan domain 2956241 2957058 1.0E-68 - . interpro_accession=IPR036866;description=Ribonuclease Z/Hydroxyacylglutathione hydrolase-like;date_run=23-03-2023;length=204;analysis=Gene3D:G3DSA:3.60.15.10;gene3d_description=- NZ_CM000441.1 InterProScan domain 2960227 2962826 1.9E-25 - . interpro_accession=IPR001667;description=DDH domain;date_run=23-03-2023;length=816;analysis=Pfam:PF01368;pfam_description=DHH family NZ_CM000441.1 InterProScan domain 2960205 2962918 8.2E-101 - . interpro_accession=-;description=-;date_run=23-03-2023;length=816;analysis=Gene3D:G3DSA:3.90.1640.30;gene3d_description=- NZ_CM000441.1 InterProScan domain 2960469 2963041 2.6E-37 - . interpro_accession=-;description=-;date_run=23-03-2023;length=816;analysis=Gene3D:G3DSA:3.10.310.30;gene3d_description=- NZ_CM000441.1 InterProScan domain 2960464 2963037 1.2E-21 - . interpro_accession=IPR003156;description=DHHA1 domain;date_run=23-03-2023;length=816;analysis=Pfam:PF02272;pfam_description=DHHA1 domain NZ_CM000441.1 InterProScan domain 2960173 2963159 2.1E-182 - . interpro_accession=IPR004610;description=Bacterial RecJ exonuclease;date_run=23-03-2023;length=816;analysis=TIGRFAM:TIGR00644;tigrfam_description=recJ: single-stranded-DNA-specific exonuclease RecJ NZ_CM000441.1 InterProScan domain 2960604 2963158 1.7E-28 - . interpro_accession=IPR041122;description=RecJ%2C OB domain;date_run=23-03-2023;length=816;analysis=Pfam:PF17768;pfam_description=RecJ OB domain NZ_CM000441.1 InterProScan domain 2966791 2966971 7.1E-14 - . interpro_accession=IPR009229;description=Staphylococcal AgrD;date_run=23-03-2023;length=48;analysis=TIGRFAM:TIGR04223;tigrfam_description=quorum_AgrD: cyclic lactone autoinducer peptide NZ_CM000441.1 InterProScan domain 2965445 2966911 5.7E-21 - . interpro_accession=IPR023885;description=4Fe4S-binding SPASM domain;date_run=23-03-2023;length=459;analysis=TIGRFAM:TIGR04085;tigrfam_description=rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain NZ_CM000441.1 InterProScan domain 2965445 2966886 5.6E-6 - . interpro_accession=IPR023885;description=4Fe4S-binding SPASM domain;date_run=23-03-2023;length=459;analysis=Pfam:PF13186;pfam_description=Iron-sulfur cluster-binding domain NZ_CM000441.1 InterProScan domain 2965104 2966929 1.8E-222 - . interpro_accession=IPR024025;description=SCIFF radical SAM maturase;date_run=23-03-2023;length=459;analysis=TIGRFAM:TIGR03974;tigrfam_description=rSAM_six_Cys: SCIFF radical SAM maturase NZ_CM000441.1 InterProScan domain 2965199 2966734 2.1E-13 - . interpro_accession=IPR007197;description=Radical SAM;date_run=23-03-2023;length=459;analysis=Pfam:PF04055;pfam_description=Radical SAM superfamily NZ_CM000441.1 InterProScan domain 2965200 2966710 2.8E-14 - . interpro_accession=-;description=-;date_run=23-03-2023;length=459;analysis=Pfam:PF13353;pfam_description=4Fe-4S single cluster domain NZ_CM000441.1 InterProScan domain 2965191 2966930 8.0E-75 - . interpro_accession=IPR013785;description=Aldolase-type TIM barrel;date_run=23-03-2023;length=459;analysis=Gene3D:G3DSA:3.20.20.70;gene3d_description=Aldolase class I NZ_CM000441.1 InterProScan domain 2975107 2977173 7.6E-57 - . interpro_accession=IPR029063;description=S-adenosyl-L-methionine-dependent methyltransferase superfamily;date_run=23-03-2023;length=577;analysis=Gene3D:G3DSA:3.40.50.150;gene3d_description=Vaccinia Virus protein VP39 NZ_CM000441.1 InterProScan domain 2975119 2977114 4.3E-22 - . interpro_accession=IPR003356;description=DNA methylase%2C adenine-specific;date_run=23-03-2023;length=577;analysis=Pfam:PF02384;pfam_description=N-6 DNA Methylase NZ_CM000441.1 InterProScan domain 2975125 2976874 4.7E-18 - . interpro_accession=-;description=-;date_run=23-03-2023;length=577;analysis=PRINTS:PR00507;prints_description=N12 class N6 adenine-specific DNA methyltransferase signature NZ_CM000441.1 InterProScan domain 2975292 2977049 4.7E-18 - . interpro_accession=-;description=-;date_run=23-03-2023;length=577;analysis=PRINTS:PR00507;prints_description=N12 class N6 adenine-specific DNA methyltransferase signature NZ_CM000441.1 InterProScan domain 2975155 2976902 4.7E-18 - . interpro_accession=-;description=-;date_run=23-03-2023;length=577;analysis=PRINTS:PR00507;prints_description=N12 class N6 adenine-specific DNA methyltransferase signature NZ_CM000441.1 InterProScan domain 2975256 2977001 4.7E-18 - . interpro_accession=-;description=-;date_run=23-03-2023;length=577;analysis=PRINTS:PR00507;prints_description=N12 class N6 adenine-specific DNA methyltransferase signature NZ_CM000441.1 InterProScan domain 2975259 2976998 - - . interpro_accession=IPR002052;description=DNA methylase%2C N-6 adenine-specific%2C conserved site;date_run=23-03-2023;length=577;analysis=ProSitePatterns:PS00092;prositepatterns_description=N-6 Adenine-specific DNA methylases signature. NZ_CM000441.1 InterProScan domain 2959653 2960284 9.5E-16 - . interpro_accession=IPR000836;description=Phosphoribosyltransferase domain;date_run=23-03-2023;length=170;analysis=Pfam:PF00156;pfam_description=Phosphoribosyl transferase domain NZ_CM000441.1 InterProScan domain 2959625 2960306 1.9E-67 - . interpro_accession=IPR029057;description=Phosphoribosyltransferase-like;date_run=23-03-2023;length=170;analysis=Gene3D:G3DSA:3.40.50.2020;gene3d_description=- NZ_CM000441.1 InterProScan domain 2959627 2960306 1.4E-71 - . interpro_accession=IPR005764;description=Adenine phosphoribosyl transferase;date_run=23-03-2023;length=170;analysis=TIGRFAM:TIGR01090;tigrfam_description=apt: adenine phosphoribosyltransferase NZ_CM000441.1 InterProScan domain 2957726 2960005 9.4E-32 - . interpro_accession=IPR012675;description=Beta-grasp domain superfamily;date_run=23-03-2023;length=735;analysis=Gene3D:G3DSA:3.10.20.30;gene3d_description=- NZ_CM000441.1 InterProScan domain 2957733 2959999 9.4E-20 - . interpro_accession=IPR004095;description=TGS;date_run=23-03-2023;length=735;analysis=Pfam:PF02824;pfam_description=TGS domain NZ_CM000441.1 InterProScan domain 2957371 2960281 5.4E-254 - . interpro_accession=IPR004811;description=RelA/SpoT family;date_run=23-03-2023;length=735;analysis=TIGRFAM:TIGR00691;tigrfam_description=spoT_relA: RelA/SpoT family protein NZ_CM000441.1 InterProScan domain 2957805 2960182 1.7E-20 - . interpro_accession=IPR045600;description=RelA/SpoT%2C AH and RIS domains;date_run=23-03-2023;length=735;analysis=Pfam:PF19296;pfam_description=RelA/SpoT%2C AH and RIS domains NZ_CM000441.1 InterProScan domain 2957999 2960282 3.7E-19 - . interpro_accession=IPR002912;description=ACT domain;date_run=23-03-2023;length=735;analysis=Pfam:PF13291;pfam_description=ACT domain NZ_CM000441.1 InterProScan domain 2957344 2959742 3.2E-82 - . interpro_accession=-;description=-;date_run=23-03-2023;length=735;analysis=Gene3D:G3DSA:1.10.3210.10;gene3d_description=Hypothetical protein af1432 NZ_CM000441.1 InterProScan domain 2957537 2959877 9.9E-48 - . interpro_accession=IPR043519;description=Nucleotidyltransferase superfamily;date_run=23-03-2023;length=735;analysis=Gene3D:G3DSA:3.30.460.10;gene3d_description=Beta Polymerase%2C domain 2 NZ_CM000441.1 InterProScan domain 2957580 2959896 1.6E-40 - . interpro_accession=IPR007685;description=RelA/SpoT;date_run=23-03-2023;length=735;analysis=Pfam:PF04607;pfam_description=Region found in RelA / SpoT proteins NZ_CM000441.1 InterProScan domain 2957999 2960285 7.4E-18 - . interpro_accession=-;description=-;date_run=23-03-2023;length=735;analysis=Gene3D:G3DSA:3.30.70.260;gene3d_description=- NZ_CM000441.1 InterProScan domain 2957371 2959727 1.8E-49 - . interpro_accession=-;description=-;date_run=23-03-2023;length=735;analysis=Pfam:PF13328;pfam_description=HD domain NZ_CM000441.1 InterProScan domain 2956871 2957462 7.7E-59 - . interpro_accession=IPR003732;description=D-aminoacyl-tRNA deacylase DTD;date_run=23-03-2023;length=149;analysis=Pfam:PF02580;pfam_description=D-Tyr-tRNA(Tyr) deacylase NZ_CM000441.1 InterProScan domain 2956870 2957467 2.0E-61 - . interpro_accession=IPR023509;description=D-aminoacyl-tRNA deacylase-like superfamily;date_run=23-03-2023;length=149;analysis=Gene3D:G3DSA:3.50.80.10;gene3d_description=- NZ_CM000441.1 InterProScan domain 2956870 2957463 7.9E-63 - . interpro_accession=IPR003732;description=D-aminoacyl-tRNA deacylase DTD;date_run=23-03-2023;length=149;analysis=TIGRFAM:TIGR00256;tigrfam_description=TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase NZ_CM000441.1 InterProScan domain 2964659 2965190 6.9E-9 - . interpro_accession=IPR001451;description=Hexapeptide repeat;date_run=23-03-2023;length=165;analysis=Pfam:PF00132;pfam_description=Bacterial transferase hexapeptide (six repeats) NZ_CM000441.1 InterProScan domain 2964575 2965236 7.6E-57 - . interpro_accession=-;description=-;date_run=23-03-2023;length=165;analysis=Gene3D:G3DSA:2.160.10.10;gene3d_description=Hexapeptide repeat proteins NZ_CM000441.1 InterProScan domain 2971600 2973327 6.2E-28 - . interpro_accession=-;description=-;date_run=23-03-2023;length=570;analysis=PRINTS:PR01736;prints_description=Phosphoenolpyruvate-protein phosphotransferase signature NZ_CM000441.1 InterProScan domain 2971429 2973160 6.2E-28 - . interpro_accession=-;description=-;date_run=23-03-2023;length=570;analysis=PRINTS:PR01736;prints_description=Phosphoenolpyruvate-protein phosphotransferase signature NZ_CM000441.1 InterProScan domain 2971583 2973310 6.2E-28 - . interpro_accession=-;description=-;date_run=23-03-2023;length=570;analysis=PRINTS:PR01736;prints_description=Phosphoenolpyruvate-protein phosphotransferase signature NZ_CM000441.1 InterProScan domain 2971636 2973360 6.2E-28 - . interpro_accession=-;description=-;date_run=23-03-2023;length=570;analysis=PRINTS:PR01736;prints_description=Phosphoenolpyruvate-protein phosphotransferase signature NZ_CM000441.1 InterProScan domain 2971159 2972994 2.2E-87 - . interpro_accession=IPR036618;description=PtsI%2C HPr-binding domain superfamily;date_run=23-03-2023;length=570;analysis=Gene3D:G3DSA:1.10.274.10;gene3d_description=- NZ_CM000441.1 InterProScan domain 2971390 2973388 1.5E-121 - . interpro_accession=IPR000121;description=PEP-utilising enzyme%2C C-terminal;date_run=23-03-2023;length=570;analysis=Pfam:PF02896;pfam_description=PEP-utilising enzyme%2C PEP-binding domain NZ_CM000441.1 InterProScan domain 2971289 2973073 1.2E-21 - . interpro_accession=IPR008279;description=PEP-utilising enzyme%2C mobile domain;date_run=23-03-2023;length=570;analysis=Pfam:PF00391;pfam_description=PEP-utilising enzyme%2C mobile domain NZ_CM000441.1 InterProScan domain 2971372 2973418 1.2E-123 - . interpro_accession=IPR040442;description=Pyruvate kinase-like domain superfamily;date_run=23-03-2023;length=570;analysis=Gene3D:G3DSA:3.20.20.60;gene3d_description=- NZ_CM000441.1 InterProScan domain 2971141 2973414 1.9E-231 - . interpro_accession=IPR006318;description=Phosphotransferase system%2C enzyme I-like;date_run=23-03-2023;length=570;analysis=TIGRFAM:TIGR01417;tigrfam_description=PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase NZ_CM000441.1 InterProScan domain 2971320 2973043 - - . interpro_accession=IPR018274;description=PEP-utilising enzyme%2C active site;date_run=23-03-2023;length=570;analysis=ProSitePatterns:PS00370;prositepatterns_description=PEP-utilizing enzymes phosphorylation site signature. NZ_CM000441.1 InterProScan domain 2971141 2972974 5.8E-33 - . interpro_accession=IPR008731;description=Phosphotransferase system%2C enzyme I N-terminal;date_run=23-03-2023;length=570;analysis=Pfam:PF05524;pfam_description=PEP-utilising enzyme%2C N-terminal NZ_CM000441.1 InterProScan domain 2971142 2973083 2.2E-87 - . interpro_accession=-;description=-;date_run=23-03-2023;length=570;analysis=Gene3D:G3DSA:3.50.30.10;gene3d_description=Phosphohistidine domain NZ_CM000441.1 InterProScan domain 2968157 2969627 1.7E-6 - . interpro_accession=IPR025197;description=Domain of unknown function DUF4116;date_run=23-03-2023;length=476;analysis=Pfam:PF13475;pfam_description=Domain of unknown function (DUF4116)