SMC
Version: 1.3.0
 
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Source: Leptospira interrogans serovar Copenhageni str. HAI0188


SMC ID 802324
Type of Sequence Whole genome sequence
NCBI Taxonomy ID 1049819
Taxonomy
SuperkingdomBacteria
PhylumSpirochaetota
ClassSpirochaetia
OrderLeptospirales
FamilyLeptospiraceae
GenusLeptospira
SpeciesLeptospira interrogans
Data Source Description GenBank
IMG Accession ID 2537561530
Genbank Accession ID GCA_000244595.3
Project Description Leptospira interrogans serovar Copenhageni str. HAI0188, whole genome sequence - NCBI GenBank
Assembly Size 4,617,362 bp
Scaffolds 31
GC Content 35.02%
BGC Count 2



Source and Analysis Files
UserFilenameFile TypeDate Added
SMC Bot GCA_000244595.3.fna  
(4.5 MB)
Nucleotide Fasta Aug 17, 2023 05:17:11 pm
SMC Bot GCA_000244595.3.filtered.secmet.gff  
(4.4 MB)
GFF Aug 17, 2023 05:17:11 pm


Biosynthetic Gene Clusters

Scale: grey bars are 1,000,000 bp.

  
NRPS
  
PKS
  
RiPP
  
Terpene
  
Alkaloid
  
Saccharide
  
Other
  
Hybrid
  
Unknown



BGC IDCompound Name (BGC Class)Location (contig:start-end)Attributes
7930653 Unknown
(Saccharide)
AHOG02000028.1:67686-117356
(49670 bp)
BGC: 0
BGC_Class: Saccharide
annotation_tool: EMERALDv0.2.4.1
7930657 Unknown
(Other)
AHOG02000028.1:119929-176527
(56598 bp)
BGC: 1
BGC_Class: Other
annotation_tool: EMERALDv0.2.4.1

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