SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): T1PKS, NRP, NRPS, NRP-metallophore, Polyketide
Source Info
Source: Mycolicibacterium austroafricanum - tax_id: 39687 (SMC-2491)
Location: NZ_CP070380.1: 3571561-3637669 (66,108 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

RefSeq
Date: May 22, 2023 03:23:45 pm

Annotation id: 162301 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 03:23:44 pm

Annotation id: 162273 download GFF for this track

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Emerald
v0.2.4.1
Date: May 22, 2023 03:23:44 pm

Annotation id: 162281 download GFF for this track

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CDDSearch
Date: May 22, 2023 03:23:45 pm

Annotation id: 162298 download GFF for this track

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InterProScan
Date: May 22, 2023 03:23:44 pm

Annotation id: 162282 download GFF for this track

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Comments (1 post)


SMC Bot
May 22, 2023 03:23:44 pm


 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NZ_CP070380.1",
    "start": "3571561",
    "end": "3637669",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "11,12,13",
    "contig_edge": "False",
    "product": "T1PKS,NRP-metallophore,NRPS",
    "region_number": "11",
    "rules": "cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)),(VibH_like or Cy_tandem or (cds(Condensation and AMP-binding) and ((IBH_Asp and not SBH_Asp) or IBH_His or TBH_Asp or CyanoBH_Asp1 or CyanoBH_Asp2 or IPL or SalSyn or (EntA and EntC) or (GrbD and GrbE) or (FbnL and FbnM) or PvdO or PvdP or (Orn_monoox and not (KtzT or MetRS-like)) or Lys_monoox or VbsL))),cds(Condensation and (AMP-binding or A-OX))",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "NZ_CP070380.1",
    "start": "3583687",
    "end": "3621752",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NZ_CP070380.1_emrld_16",
    "nearest_MiBIG": "BGC0001417",
    "nearest_MiBIG_class": "NRP Polyketide",
    "nearest_MiBIG_diceDistance": "0.417",
    "score": "0.930",
    "partial": "00"
  }
]

 
 

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