SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): Saccharide, Polyketide, T3PKS
Source Info
Source: Mycolicibacterium austroafricanum - tax_id: 39687 (SMC-2491)
Location: NZ_CP070380.1: 1525955-1582382 (56,427 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

RefSeq
Date: May 22, 2023 03:23:42 pm

Annotation id: 162174 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 03:23:42 pm

Annotation id: 162167 download GFF for this track

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Emerald
v0.2.4.1
Date: May 22, 2023 03:23:42 pm

Annotation id: 162169 download GFF for this track

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CDDSearch
Date: May 22, 2023 03:23:42 pm

Annotation id: 162173 download GFF for this track

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InterProScan
Date: May 22, 2023 03:23:42 pm

Annotation id: 162170 download GFF for this track

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Comments (1 post)


SMC Bot
May 22, 2023 03:23:42 pm
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NZ_CP070380.1",
    "start": "1525955",
    "end": "1550611",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NZ_CP070380.1_emrld_8",
    "nearest_MiBIG": "BGC0000786",
    "nearest_MiBIG_class": "Saccharide",
    "nearest_MiBIG_diceDistance": "0.583",
    "score": "0.470",
    "partial": "00"
  },
  {
    "SequenceID/Contig": "NZ_CP070380.1",
    "start": "1541282",
    "end": "1582382",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "5",
    "contig_edge": "False",
    "product": "T3PKS",
    "region_number": "5",
    "rules": "(Chal_sti_synt_C or Chal_sti_synt_N)",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "NZ_CP070380.1",
    "start": "1560180",
    "end": "1564300",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NZ_CP070380.1_emrld_9",
    "nearest_MiBIG": "BGC0000282",
    "nearest_MiBIG_class": "Polyketide",
    "nearest_MiBIG_diceDistance": "0.524",
    "score": "0.680",
    "partial": "00"
  }
]
 
 

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