SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): T1PKS, Other, NRPS, NRP
Source Info
Source: Mycolicibacterium austroafricanum - tax_id: 39687 (SMC-2491)
Location: NZ_CP070380.1: 721332-787652 (66,320 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

RefSeq
Date: May 22, 2023 03:23:41 pm

Annotation id: 162128 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 03:23:41 pm

Annotation id: 162117 download GFF for this track

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Emerald
v0.2.4.1
Date: May 22, 2023 03:23:41 pm

Annotation id: 162121 download GFF for this track

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CDDSearch
Date: May 22, 2023 03:23:41 pm

Annotation id: 162126 download GFF for this track

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InterProScan
Date: May 22, 2023 03:23:41 pm

Annotation id: 162122 download GFF for this track

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Comments (1 post)


SMC Bot
May 22, 2023 03:23:41 pm
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NZ_CP070380.1",
    "start": "721332",
    "end": "781041",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "1",
    "contig_edge": "False",
    "product": "T1PKS,NRPS",
    "region_number": "1",
    "rules": "cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)),cds(Condensation and (AMP-binding or A-OX))",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "NZ_CP070380.1",
    "start": "735490",
    "end": "769719",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NZ_CP070380.1_emrld_4",
    "nearest_MiBIG": "BGC0000353",
    "nearest_MiBIG_class": "NRP",
    "nearest_MiBIG_diceDistance": "0.367",
    "score": "0.980",
    "partial": "00"
  },
  {
    "SequenceID/Contig": "NZ_CP070380.1",
    "start": "779999",
    "end": "787652",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NZ_CP070380.1_emrld_5",
    "nearest_MiBIG": "BGC0000902",
    "nearest_MiBIG_class": "Other",
    "nearest_MiBIG_diceDistance": "0.625",
    "score": "0.740",
    "partial": "00"
  }
]
 
 

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