SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): NI-siderophore, Terpene, Other
Source Info
Source: Bacillus pumilus - tax_id: 1408 (SMC-1885)
Location: NZ_CP047089.1: 2148748-2177347 (28,599 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

RefSeq
Date: May 22, 2023 03:07:08 pm

Annotation id: 129851 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 03:07:08 pm

Annotation id: 129839 download GFF for this track

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Emerald
v0.2.4.1
Date: May 22, 2023 03:07:08 pm

Annotation id: 129840 download GFF for this track

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CDDSearch
Date: May 22, 2023 03:07:08 pm

Annotation id: 129846 download GFF for this track

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InterProScan
Date: May 22, 2023 03:07:08 pm

Annotation id: 129841 download GFF for this track

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Comments (1 post)


SMC Bot
May 22, 2023 03:07:08 pm


 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NZ_CP047089.1",
    "start": "2148748",
    "end": "2177347",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "7,8,9",
    "contig_edge": "False",
    "product": "terpene,NRPS-independent-siderophore",
    "region_number": "7",
    "rules": "(Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5),IucA_IucC",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "NZ_CP047089.1",
    "start": "2153042",
    "end": "2176842",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NZ_CP047089.1_emrld_8",
    "nearest_MiBIG": "BGC0001478",
    "nearest_MiBIG_class": "Other",
    "nearest_MiBIG_diceDistance": "0.679",
    "score": "0.710",
    "partial": "00"
  }
]

 
 

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