SMC
Version: 1.3.0
 
Login

BGC Info
Compound Name: Unknown
BGC Class(es): Terpene
Source Info
Source: uncultured Candidatus Poseidoniales archaeon - tax_id: 274854 (SMC-1359741)
Location: CAXHGP010000229.1: 1-3186 (3,185 bp) download BGC sequence

Login to upload an annotation

Scale: Bars are 1000 base pairs              

GenBank
Date: Aug 22, 2024 02:51:57 pm

Annotation id: 61848600 download GFF for this track

Hide

antiSMASH
v7.1.0
Date: Aug 22, 2024 02:51:57 pm

Annotation id: 61848596 download GFF for this track

Hide

Emerald
v0.2.4.1
Date: Aug 22, 2024 02:51:57 pm

Annotation id: 61848597 download GFF for this track

Hide

CDDSearch
Date: Aug 22, 2024 02:51:57 pm

Annotation id: 61848599 download GFF for this track

Hide

InterProScan
Date: Aug 22, 2024 02:51:57 pm

Annotation id: 61848598 download GFF for this track

Hide

           

Comments (1 post)


SMC Bot
Aug 22, 2024 02:51:57 pm


 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "CAXHGP010000229.1",
    "start": "1",
    "end": "3186",
    "annotation_tool": "antiSMASHv7.1.0",
    "candidate_cluster_numbers": "1",
    "contig_edge": "True",
    "product": "terpene",
    "region_number": "1",
    "rules": "(Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "CAXHGP010000229.1",
    "start": "2",
    "end": "3091",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "CAXHGP010000229.1_emrld_1",
    "nearest_MiBIG": "BGC0000683",
    "nearest_MiBIG_class": "Terpene",
    "nearest_MiBIG_diceDistance": "0.500",
    "score": "0.980",
    "partial": "11"
  }
]

 
 

   login to post or reply to a comment