SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): Other, T3PKS
Source Info
Source: Microcystis sp. M116S2 - tax_id: 2771141 (SMC-1228999)
Location: JADBTL010000085.1: 1-11917 (11,916 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

GenBank
Date: Nov 18, 2023 09:48:42 pm

Annotation id: 56543219 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: Nov 18, 2023 09:48:42 pm

Annotation id: 56543211 download GFF for this track

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Emerald
v0.2.4.1
Date: Nov 18, 2023 09:48:42 pm

Annotation id: 56543214 download GFF for this track

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CDDSearch
Date: Nov 18, 2023 09:48:42 pm

Annotation id: 56543218 download GFF for this track

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InterProScan
Date: Nov 18, 2023 09:48:42 pm

Annotation id: 56543215 download GFF for this track

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Comments (1 post)


SMC Bot
Nov 18, 2023 09:48:42 pm
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "JADBTL010000085.1",
    "start": "1",
    "end": "11917",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "1",
    "contig_edge": "True",
    "product": "T3PKS",
    "region_number": "1",
    "rules": "(Chal_sti_synt_C or Chal_sti_synt_N)",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "JADBTL010000085.1",
    "start": "2",
    "end": "8869",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "JADBTL010000085.1_emrld_1",
    "nearest_MiBIG": "BGC0002036",
    "nearest_MiBIG_class": "Other",
    "nearest_MiBIG_diceDistance": "0.720",
    "score": "0.720",
    "partial": "10"
  }
]
 
 

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