SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): RiPP, Microviridin
Source Info
Source: Microcystis sp. M116S2 - tax_id: 2771141 (SMC-1228999)
Location: JADBTL010000037.1: 20395-38494 (18,099 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

GenBank
Date: Nov 18, 2023 09:48:42 pm

Annotation id: 56543173 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: Nov 18, 2023 09:48:41 pm

Annotation id: 56543167 download GFF for this track

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Emerald
v0.2.4.1
Date: Nov 18, 2023 09:48:42 pm

Annotation id: 56543169 download GFF for this track

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CDDSearch
Date: Nov 18, 2023 09:48:42 pm

Annotation id: 56543172 download GFF for this track

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InterProScan
Date: Nov 18, 2023 09:48:42 pm

Annotation id: 56543171 download GFF for this track

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Comments (1 post)


SMC Bot
Nov 18, 2023 09:48:41 pm
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "JADBTL010000037.1",
    "start": "20395",
    "end": "38494",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "1",
    "contig_edge": "True",
    "product": "microviridin",
    "region_number": "1",
    "rules": "(mvd or mvnA)",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "JADBTL010000037.1",
    "start": "28592",
    "end": "37297",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "JADBTL010000037.1_emrld_1",
    "nearest_MiBIG": "BGC0000592",
    "nearest_MiBIG_class": "RiPP",
    "nearest_MiBIG_diceDistance": "0.273",
    "score": "0.880",
    "partial": "00"
  }
]
 
 

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