antiSMASH
v7.0.0beta1-67b538a9
Date: May 25, 2023 08:35:32 am
Annotation id: 5326862
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Emerald
v0.2.4.1
Date: May 25, 2023 08:35:32 am
Annotation id: 5326881
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CDDSearch
Date: May 25, 2023 08:35:32 am
Annotation id: 5326892
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InterProScan
Date: May 25, 2023 08:35:32 am
Annotation id: 5326882
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Comments (1 post)
SMC Bot May 25, 2023 08:35:32 am
FlaggedHidden
This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:
[
{
"SequenceID/Contig": "NZ_JHVW01000003.1",
"start": "1",
"end": "24276",
"annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
"candidate_cluster_numbers": "1,2,3",
"contig_edge": "True",
"product": "RRE-containing,T1PKS",
"region_number": "1",
"rules": "minimum(1%2C [Bottromycin_Methyltransferase_RRE%2C Cyanobactin_D_RRE%2C Cytolysin_C_RRE%2C Goadsporin_CD_RRE%2C Heterocycloanthracin_C_RRE%2C Lanthipeptide_LanB_RRE%2C Lasso_Fused_RRE%2C Mycofactocin_RRE%2C NHLP_CD_RRE%2C Other_Sactipeptide_rSAM_RRE%2C Pantocin_Microcin_RRE%2C Plantazolicin_C_RRE%2C PlpY_RRE%2C PqqD_RRE%2C Proteusin_Epimerase_RRE%2C Proteusin_Methyltransferase_RRE%2C Quinohemoprotein_rSAM_RRE%2C Ranthipeptide_rSAM_RRE%2C Stand_Alone_Lasso_RRE%2C Streptide_RRE%2C Subtilosin_rSAM_RRE%2C Thiaglutamate_B_RRE%2C Thiaglutamate_G_RRE%2C Thiaglutamate_I_RRE%2C Thiopeptide_F_RRE%2C Thuricin_rSAM_RRE%2C Thurincin_rSAM_RRE%2C Trifolitoxin_RRE]),cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))",
"tool": "antismash"
},
{
"SequenceID/Contig": "NZ_JHVW01000003.1",
"start": "3",
"end": "166875",
"annotation_tool": "EMERALDv0.2.4.1",
"ID": "NZ_JHVW01000003.1_emrld_1",
"nearest_MiBIG": "BGC0000150",
"nearest_MiBIG_class": "NRP Polyketide",
"nearest_MiBIG_diceDistance": "0.373",
"score": "0.850",
"partial": "10"
},
{
"SequenceID/Contig": "NZ_JHVW01000003.1",
"start": "25751",
"end": "104843",
"annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
"candidate_cluster_numbers": "4,5,6",
"contig_edge": "False",
"product": "NRPS-like,T1PKS",
"region_number": "2",
"rules": "cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX)),cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))",
"tool": "antismash"
},
{
"SequenceID/Contig": "NZ_JHVW01000003.1",
"start": "106448",
"end": "157090",
"annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
"candidate_cluster_numbers": "7",
"contig_edge": "False",
"product": "NRPS,T1PKS",
"region_number": "3",
"rules": "cds(Condensation and (AMP-binding or A-OX)),cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))",
"tool": "antismash"
}
]
Comments (1 post)
SMC Bot
May 25, 2023 08:35:32 am
Flagged Hidden
This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format: