SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): Polyketide, NRPS
Source Info
Source: Xanthomonas campestris pv. campestris str. CFBP 12824 - tax_id: 1357997 (SMC-431)
Location: NZ_CM002622.1: 2478519-2520028 (41,509 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

RefSeq
Date: May 22, 2023 02:31:46 pm

Annotation id: 51799 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 02:31:46 pm

Annotation id: 51789 download GFF for this track

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Emerald
v0.2.4.1
Date: May 22, 2023 02:31:46 pm

Annotation id: 51793 download GFF for this track

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CDDSearch
Date: May 22, 2023 02:31:46 pm

Annotation id: 51797 download GFF for this track

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InterProScan
Date: May 22, 2023 02:31:46 pm

Annotation id: 51794 download GFF for this track

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Comments (1 post)


SMC Bot
May 22, 2023 02:31:46 pm
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NZ_CM002622.1",
    "start": "2478519",
    "end": "2520028",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "3",
    "contig_edge": "False",
    "product": "NRPS",
    "region_number": "3",
    "rules": "cds(Condensation and (AMP-binding or A-OX))",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "NZ_CM002622.1",
    "start": "2490437",
    "end": "2504005",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NZ_CM002622.1_emrld_4",
    "nearest_MiBIG": "BGC0000835",
    "nearest_MiBIG_class": "Polyketide",
    "nearest_MiBIG_diceDistance": "0.509",
    "score": "0.780",
    "partial": "00"
  }
]
 
 

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