SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): Redox cofactor
Source Info
Source: Xanthomonas campestris pv. campestris str. CFBP 12824 - tax_id: 1357997 (SMC-431)
Location: NZ_CM002622.1: 1463439-1485593 (22,154 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

RefSeq
Date: May 22, 2023 02:31:46 pm

Annotation id: 51772 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 02:31:46 pm

Annotation id: 51766 download GFF for this track

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CDDSearch
Date: May 22, 2023 02:31:46 pm

Annotation id: 51768 download GFF for this track

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InterProScan
Date: May 22, 2023 02:31:46 pm

Annotation id: 51767 download GFF for this track

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Comments (1 post)


SMC Bot
May 22, 2023 02:31:46 pm


 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NZ_CM002622.1",
    "start": "1463439",
    "end": "1485593",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "2",
    "contig_edge": "False",
    "product": "redox-cofactor",
    "region_number": "2",
    "rules": "(cds(PF04055 and (TIGR04085 or SPASM)) and (TIGR02111 or TIGR03966) and minimum(1%2C [Bottromycin_Methyltransferase_RRE%2C Cyanobactin_D_RRE%2C Cytolysin_C_RRE%2C Goadsporin_CD_RRE%2C Heterocycloanthracin_C_RRE%2C Lanthipeptide_LanB_RRE%2C Lasso_Fused_RRE%2C Mycofactocin_RRE%2C NHLP_CD_RRE%2C Other_Sactipeptide_rSAM_RRE%2C Pantocin_Microcin_RRE%2C Plantazolicin_C_RRE%2C PlpY_RRE%2C PqqD_RRE%2C Proteusin_Epimerase_RRE%2C Proteusin_Methyltransferase_RRE%2C Quinohemoprotein_rSAM_RRE%2C Ranthipeptide_rSAM_RRE%2C Stand_Alone_Lasso_RRE%2C Streptide_RRE%2C Subtilosin_rSAM_RRE%2C Thiaglutamate_B_RRE%2C Thiaglutamate_G_RRE%2C Thiaglutamate_I_RRE%2C Thiopeptide_F_RRE%2C Thuricin_rSAM_RRE%2C Thurincin_rSAM_RRE%2C Trifolitoxin_RRE]))",
    "tool": "antismash"
  }
]

 
 

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