SMC
Version: 1.3.0
 
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BGC Info
Compound Name: Unknown
BGC Class(es): NI-siderophore, Other
Source Info
Source: Xanthomonas campestris pv. campestris str. CFBP 12824 - tax_id: 1357997 (SMC-431)
Location: NZ_CM002622.1: 1384337-1419045 (34,708 bp) download BGC sequence

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Scale: Bars are 1000 base pairs              

RefSeq
Date: May 22, 2023 02:31:46 pm

Annotation id: 51762 download GFF for this track

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antiSMASH
v7.0.0beta1-67b538a9
Date: May 22, 2023 02:31:46 pm

Annotation id: 51752 download GFF for this track

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Emerald
v0.2.4.1
Date: May 22, 2023 02:31:46 pm

Annotation id: 51756 download GFF for this track

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CDDSearch
Date: May 22, 2023 02:31:46 pm

Annotation id: 51760 download GFF for this track

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InterProScan
Date: May 22, 2023 02:31:46 pm

Annotation id: 51757 download GFF for this track

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Comments (1 post)


SMC Bot
May 22, 2023 02:31:46 pm
 

This BGC may be derived from merging overlapping BGC calls from multiple genome mining tools. The GFF attributes from the original BGC annotations are shown below in JSON format:

[
  {
    "SequenceID/Contig": "NZ_CM002622.1",
    "start": "1384337",
    "end": "1399061",
    "annotation_tool": "antiSMASHv7.0.0beta1-67b538a9",
    "candidate_cluster_numbers": "1",
    "contig_edge": "False",
    "product": "NRPS-independent-siderophore",
    "region_number": "1",
    "rules": "IucA_IucC",
    "tool": "antismash"
  },
  {
    "SequenceID/Contig": "NZ_CM002622.1",
    "start": "1387248",
    "end": "1419045",
    "annotation_tool": "EMERALDv0.2.4.1",
    "ID": "NZ_CM002622.1_emrld_1",
    "nearest_MiBIG": "BGC0001408",
    "nearest_MiBIG_class": "Other",
    "nearest_MiBIG_diceDistance": "0.486",
    "score": "0.620",
    "partial": "00"
  }
]
 
 

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